News

SARS-CoV-2 Paper "Sampling SARS-CoV-2 proteomes for predicted CD8 T-cell epitopes as a tool for understanding immunogenic breadth and rationale vaccine design " published with IAVI (Imperial University)

Utilizing Computational Machine Learning Tools to Understand Immunogenic Breadth in the Context of a CD8 T-Cell Mediated HIV Response." (see paper).

Have infrastructure and skills to prepare (Python / Biopython), process (Windows, Ubuntu, CentOS) and manage (PostgreSQL) the results for large scale NetMHCpan-4.1 gene sequence simulations (e.g., 1000s of sequences, multiple HLA, billions of results in databases). Recent small tasks have included python scripts to identify potential epitope mutations, re-format gene sequences, NetMHCpan runs across multiple servers to identify potential epitopes (Vaccine research) for Chikungunya Virus and Respiratory Syncytial Virus (RSV).

Pro bono work undertaken.  

Design and developed 3 systems for TwinsUK research (Kings College London) for the registration of twins for medical studies, storage of clinical results data and onward dissemination for research. (Rails, Python, Pandas, PostgreSQL, APIs)

SortYourHelp (Photo by Millie Pilkington)

Having built a secure recruitment system (job adverts, forms etc.) for SortYourHelp long ago, a complete refresh of the site is now complete....and the pram make it looks older!

Kiki’s Childrens’ Clinic, based in South London, offers Paediatric Physiotherapy, Occupational Therapy, Speech and Language Therapy.  The mobile friendly site www.kikisclinic.com was quickly built using SiteInABox to provide the information mobile users require (location, therapies, contact details) and a richer experience (larger feature pictures) to desktop/PC users.  

Headless Raspberry Pi Zero Wireless

Project demonstrating cheap (Raspberry Pi Zero - tiny Unix server ) hardware and P4wnPi (with bespoke Python enhancements) can remotely obtain passwords from a PC, Chrome and IE. For a few pounds of hardware and a few seconds access to your home or office, someone can readily steal your passwords. Escort guests in your office and buy a good Password Manager! Created as part of Information Security MSc at Royal Holloway (software security).